Souvik Bag, Soumendranath Chatterjee
Animal
17 July 2025
The bioinformatics analysis was conducted using an in-house pipeline at N2JENOMICS LAB. Initially, Adapter Removal (version 2.3.2) was used to trim adapters and low-quality reads. The cleaned reads were then aligned to the reference genome using Hisat2 (version 2.2.1) to generate mapped read files.